Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm24254-201ENSMUST00000083702 104 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim28Q62318 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Trim28Q62318 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim28Q62318 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim28Q62318 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim28Q62318 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Mir466n-201ENSMUST00000104798 94 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm14766-201ENSMUST00000121689 367 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm23121-201ENSMUST00000157653 173 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm23782-201ENSMUST00000157939 120 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm23024-201ENSMUST00000158770 292 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm16290-201ENSMUST00000161175 474 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm22646-201ENSMUST00000175130 115 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm21991-201ENSMUST00000180006 508 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm29408-201ENSMUST00000187536 216 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.24□□□□□ -1.57
Trim28Q62318 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm45316-201ENSMUST00000210128 162 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.24□□□□□ -1.57
Trim28Q62318 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim28Q62318 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm26273-201ENSMUST00000104180 131 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm14714-201ENSMUST00000119743 439 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm3835-201ENSMUST00000120752 403 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm23959-201ENSMUST00000157208 324 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm22519-201ENSMUST00000158270 178 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm22434-201ENSMUST00000158549 122 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm22501-201ENSMUST00000158981 127 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim28Q62318 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm23269-201ENSMUST00000178701 107 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim28Q62318 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm29490-201ENSMUST00000190923 342 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm21006-201ENSMUST00000196930 667 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Igkv15-97-201ENSMUST00000197637 339 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm43028-201ENSMUST00000202561 481 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Gm19219-201ENSMUST00000215863 724 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim28Q62318 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm26072-201ENSMUST00000083135 107 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim28Q62318 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim28Q62318 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.23□□□□□ -1.57
Trim28Q62318 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim28Q62318 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm25420-201ENSMUST00000104216 127 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm24792-201ENSMUST00000104286 128 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm22480-201ENSMUST00000122568 128 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim28Q62318 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm22889-201ENSMUST00000158639 58 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm24315-201ENSMUST00000177835 127 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm27773-201ENSMUST00000184087 78 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm29563-201ENSMUST00000187249 496 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.22□□□□□ -1.57
Trim28Q62318 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm43315-201ENSMUST00000198120 313 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm44583-201ENSMUST00000207478 281 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm7624-201ENSMUST00000209702 435 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm45539-201ENSMUST00000210313 428 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm34005-201ENSMUST00000215834 282 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms