Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.21□□□□□ -1.57
Rnf180Q3U827 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm22750-201ENSMUST00000102076 103 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm14711-201ENSMUST00000117056 217 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm12370-201ENSMUST00000117809 604 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm14142-201ENSMUST00000117833 296 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm14358-201ENSMUST00000118458 403 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm15313-201ENSMUST00000119179 282 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm15981-201ENSMUST00000119196 457 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm11321-201ENSMUST00000121257 902 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm23084-201ENSMUST00000157850 114 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm19203-201ENSMUST00000174049 939 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm9892-201ENSMUST00000182415 992 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm27313-201ENSMUST00000183500 142 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm29104-201ENSMUST00000186304 222 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm42428-201ENSMUST00000198677 302 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm32536-201ENSMUST00000205209 445 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm29884-201ENSMUST00000218403 453 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Gm23242-201ENSMUST00000083055 107 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Mir34b-201ENSMUST00000083558 84 ntBASIC5.21□□□□□ -1.58
Rnf180Q3U827 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rnf180Q3U827 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Mir673-201ENSMUST00000102361 91 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm15151-201ENSMUST00000117106 177 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm14835-201ENSMUST00000119039 315 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm15231-201ENSMUST00000119174 447 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm24008-201ENSMUST00000157733 138 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Mir6401-201ENSMUST00000184499 109 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm18505-201ENSMUST00000187360 790 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm28779-201ENSMUST00000189678 323 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm43855-201ENSMUST00000197462 507 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm2522-201ENSMUST00000204280 322 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm23455-201ENSMUST00000083331 100 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Gm8473-201ENSMUST00000176697 1885 ntBASIC5.2□□□□□ -1.58
Rnf180Q3U827 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm11673-201ENSMUST00000117846 331 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm13785-201ENSMUST00000119099 690 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm23499-201ENSMUST00000157736 268 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm23619-201ENSMUST00000178411 94 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm24897-201ENSMUST00000179033 107 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm25474-201ENSMUST00000179052 94 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm22047-201ENSMUST00000179176 94 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm17906-201ENSMUST00000202480 901 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Gm44513-201ENSMUST00000206811 439 ntBASIC5.19□□□□□ -1.58
Rnf180Q3U827 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms