Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm26968-201ENSMUST00000182894 481 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.23□□□□□ -1.73
Lig3P97386 Gm27249-201ENSMUST00000185049 328 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm29563-201ENSMUST00000187249 496 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm37727-201ENSMUST00000191637 819 ntBASIC4.23□□□□□ -1.73
Lig3P97386 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lig3P97386 Gm22897-201ENSMUST00000197860 128 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm43651-201ENSMUST00000199796 439 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm43198-201ENSMUST00000200927 326 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.23□□□□□ -1.73
Lig3P97386 Gm17987-201ENSMUST00000206902 603 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm18410-201ENSMUST00000207199 577 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm45553-201ENSMUST00000209929 507 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm45912-201ENSMUST00000210646 543 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm8748-201ENSMUST00000211125 587 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Gm8231-201ENSMUST00000221617 783 ntBASIC4.23□□□□□ -1.73
Lig3P97386 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.23□□□□□ -1.73
Lig3P97386 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig3P97386 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.23□□□□□ -1.73
Lig3P97386 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig3P97386 Gm6462-201ENSMUST00000081488 304 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lig3P97386 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.23□□□□□ -1.73
Lig3P97386 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig3P97386 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.23□□□□□ -1.73
Lig3P97386 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Lig3P97386 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Lig3P97386 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Lig3P97386 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.22□□□□□ -1.73
Lig3P97386 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm14559-201ENSMUST00000121745 496 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.22□□□□□ -1.73
Lig3P97386 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Gm23231-201ENSMUST00000157299 104 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm22840-201ENSMUST00000158444 136 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm23022-201ENSMUST00000158768 180 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Gm14527-201ENSMUST00000179300 639 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm36964-201ENSMUST00000191876 198 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm38281-201ENSMUST00000192301 315 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm38395-201ENSMUST00000199904 830 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm43440-201ENSMUST00000201957 729 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm17989-201ENSMUST00000211543 412 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm18252-203ENSMUST00000215855 757 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm4052-201ENSMUST00000220890 451 ntBASIC4.22□□□□□ -1.73
Lig3P97386 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.22□□□□□ -1.73
Lig3P97386 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm25582-201ENSMUST00000083412 110 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lig3P97386 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lig3P97386 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Lig3P97386 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.22□□□□□ -1.73
Lig3P97386 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.22□□□□□ -1.73
Lig3P97386 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Lig3P97386 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.21□□□□□ -1.73
Lig3P97386 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Lig3P97386 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lig3P97386 Gm23226-201ENSMUST00000116927 103 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm14360-201ENSMUST00000120670 393 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm3835-201ENSMUST00000120752 403 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm14600-201ENSMUST00000121032 630 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm16373-201ENSMUST00000129517 303 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lig3P97386 Gm23034-201ENSMUST00000158001 147 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm22889-201ENSMUST00000158639 58 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lig3P97386 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lig3P97386 Gm18417-201ENSMUST00000176564 648 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.21□□□□□ -1.74
Lig3P97386 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lig3P97386 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Gm28489-201ENSMUST00000186655 316 ntBASIC4.21□□□□□ -1.74
Lig3P97386 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.21□□□□□ -1.74
Lig3P97386 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lig3P97386 Gm38088-201ENSMUST00000195829 241 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lig3P97386 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.21□□□□□ -1.74
Lig3P97386 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.21□□□□□ -1.74
Lig3P97386 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.21□□□□□ -1.74
Lig3P97386 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lig3P97386 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lig3P97386 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.21□□□□□ -1.74
Lig3P97386 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Lig3P97386 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Lig3P97386 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Lig3P97386 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lig3P97386 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms