Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm23053-201ENSMUST00000175136 96 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm27522-201ENSMUST00000183949 230 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm29228-201ENSMUST00000185489 418 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm35931-201ENSMUST00000203931 448 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm19177-201ENSMUST00000204520 613 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm44650-201ENSMUST00000206929 194 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 AC211878.2-201ENSMUST00000222486 488 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm3565-201ENSMUST00000222670 609 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm25481-201ENSMUST00000083221 158 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Mir383-201ENSMUST00000083523 70 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Sdc1P18828 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Sdc1P18828 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm14628-201ENSMUST00000117508 635 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm12025-201ENSMUST00000117768 144 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm11600-201ENSMUST00000119592 240 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm12543-201ENSMUST00000120410 543 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm23465-201ENSMUST00000157134 262 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm26312-201ENSMUST00000157769 165 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm22530-201ENSMUST00000158820 118 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm27355-201ENSMUST00000185045 128 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm37002-201ENSMUST00000194560 373 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm44634-201ENSMUST00000206119 152 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.84□□□□□ -1.95
Sdc1P18828 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm3829-201ENSMUST00000222362 619 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Gm18338-201ENSMUST00000222381 560 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Ap3m1-208ENSMUST00000224016 764 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Sdc1P18828 Mecom-201ENSMUST00000061088 348 ntBASIC2.84□□□□□ -1.95
Sdc1P18828 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Sdc1P18828 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.84□□□□□ -1.96
Sdc1P18828 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Sdc1P18828 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Sdc1P18828 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.83□□□□□ -1.96
Sdc1P18828 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm14554-201ENSMUST00000119548 661 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm13973-201ENSMUST00000121371 894 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm15263-201ENSMUST00000121556 642 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm9001-201ENSMUST00000121642 399 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm23183-201ENSMUST00000122595 323 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm26349-201ENSMUST00000157530 130 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm4761-201ENSMUST00000178086 582 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm26365-201ENSMUST00000179177 94 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Mir6971-201ENSMUST00000183497 63 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm44513-201ENSMUST00000206811 439 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm18268-201ENSMUST00000208445 943 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms