Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RaraP11416 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RaraP11416 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.45□□□□□ -1.54
RaraP11416 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RaraP11416 Gm12820-201ENSMUST00000119233 342 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm13239-201ENSMUST00000119920 637 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm12087-201ENSMUST00000121878 258 ntBASIC5.45□□□□□ -1.54
RaraP11416 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Gm23965-201ENSMUST00000157969 142 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm25555-201ENSMUST00000158078 111 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm23258-201ENSMUST00000158319 106 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm25714-201ENSMUST00000158626 296 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.45□□□□□ -1.54
RaraP11416 Gm25361-201ENSMUST00000179358 76 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm29159-201ENSMUST00000187969 379 ntBASIC5.45□□□□□ -1.54
RaraP11416 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm9442-201ENSMUST00000194242 319 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.45□□□□□ -1.54
RaraP11416 Gm44336-201ENSMUST00000203696 468 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm45395-201ENSMUST00000209891 559 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm46389-201ENSMUST00000223199 392 ntBASIC5.45□□□□□ -1.54
RaraP11416 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.45□□□□□ -1.54
RaraP11416 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RaraP11416 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RaraP11416 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.45□□□□□ -1.54
RaraP11416 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RaraP11416 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.45□□□□□ -1.54
RaraP11416 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RaraP11416 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RaraP11416 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.44□□□□□ -1.54
RaraP11416 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RaraP11416 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
RaraP11416 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.44□□□□□ -1.54
RaraP11416 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Gm15215-201ENSMUST00000117773 489 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm15994-201ENSMUST00000118029 402 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm15357-201ENSMUST00000119160 285 ntBASIC5.44□□□□□ -1.54
RaraP11416 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.44□□□□□ -1.54
RaraP11416 Gm24784-201ENSMUST00000157640 62 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm25666-201ENSMUST00000157702 107 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm25643-201ENSMUST00000158874 103 ntBASIC5.44□□□□□ -1.54
RaraP11416 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RaraP11416 Gm25939-201ENSMUST00000179876 191 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.44□□□□□ -1.54
RaraP11416 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RaraP11416 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.44□□□□□ -1.54
RaraP11416 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RaraP11416 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm8288-201ENSMUST00000223406 593 ntBASIC5.44□□□□□ -1.54
RaraP11416 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.44□□□□□ -1.54
RaraP11416 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RaraP11416 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.44□□□□□ -1.54
RaraP11416 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.44□□□□□ -1.54
RaraP11416 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RaraP11416 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.43□□□□□ -1.54
RaraP11416 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RaraP11416 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Gm14622-201ENSMUST00000117117 468 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm14871-201ENSMUST00000119056 194 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm14570-201ENSMUST00000119444 391 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm7219-201ENSMUST00000119619 297 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm11742-201ENSMUST00000119903 233 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm12815-201ENSMUST00000121737 135 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm22345-201ENSMUST00000122644 107 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.43□□□□□ -1.54
RaraP11416 Gm25966-201ENSMUST00000157169 117 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm25058-201ENSMUST00000157365 128 ntBASIC5.43□□□□□ -1.54
RaraP11416 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Gm4761-201ENSMUST00000178086 582 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm22263-201ENSMUST00000180060 104 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Gm27960-201ENSMUST00000183445 184 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm27409-201ENSMUST00000184727 80 ntBASIC5.43□□□□□ -1.54
RaraP11416 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm37421-201ENSMUST00000193088 132 ntBASIC5.43□□□□□ -1.54
RaraP11416 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm42672-201ENSMUST00000197821 352 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms