Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm45223-201ENSMUST00000207037 5138 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm23322-201ENSMUST00000104464 167 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm28650-201ENSMUST00000188413 411 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 LOC667541-201ENSMUST00000223408 278 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm26121-201ENSMUST00000083364 162 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm25755-201ENSMUST00000083396 107 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm25466-201ENSMUST00000103995 132 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm25274-201ENSMUST00000104296 135 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm13170-201ENSMUST00000119716 643 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm25170-201ENSMUST00000104191 129 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm25496-201ENSMUST00000104430 120 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm12288-201ENSMUST00000121054 1282 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm46138-201ENSMUST00000215294 426 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm22472-201ENSMUST00000104115 134 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm12871-201ENSMUST00000118758 438 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.8□□□□□ -1.96
Col6a3E9PWQ3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm13865-201ENSMUST00000120957 865 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm45006-201ENSMUST00000206078 690 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm19366-201ENSMUST00000206996 156 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm25902-201ENSMUST00000158493 318 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm27668-201ENSMUST00000184188 120 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm23136-201ENSMUST00000083425 99 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a3E9PWQ3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm22961-201ENSMUST00000157964 106 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm22859-201ENSMUST00000174978 122 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm6649-201ENSMUST00000199743 1165 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm17890-201ENSMUST00000221419 757 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 AC117202.1-201ENSMUST00000227007 445 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm21286-201ENSMUST00000098035 545 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms