Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm14848-201ENSMUST00000121850 467 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm24720-201ENSMUST00000157518 166 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm24757-201ENSMUST00000176987 371 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm29602-201ENSMUST00000186887 442 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm19498-201ENSMUST00000191128 331 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm24261-201ENSMUST00000083744 104 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
Col6a5A6H584 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a5A6H584 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a5A6H584 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm14880-201ENSMUST00000117581 292 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm11285-201ENSMUST00000118443 322 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm14570-201ENSMUST00000119444 391 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm5384-201ENSMUST00000120313 463 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 DQ267100-201ENSMUST00000122600 72 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm26993-201ENSMUST00000182766 789 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Mir7242-201ENSMUST00000183710 79 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Gm43491-201ENSMUST00000197133 784 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.2□□□□□ -2.06
Col6a5A6H584 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a5A6H584 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm15074-201ENSMUST00000117603 936 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm15377-201ENSMUST00000119594 246 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm9225-201ENSMUST00000121921 836 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm23714-201ENSMUST00000179259 105 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm38076-201ENSMUST00000193889 450 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 AC192333.5-201ENSMUST00000224620 2350 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm22469-201ENSMUST00000104118 133 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm17072-201ENSMUST00000166673 658 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm17711-201ENSMUST00000172028 237 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm22264-201ENSMUST00000178200 107 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm26933-201ENSMUST00000182320 827 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm28263-201ENSMUST00000185884 400 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm3489-201ENSMUST00000190083 528 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm45498-201ENSMUST00000210346 283 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 Gm7530-201ENSMUST00000218466 605 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.19□□□□□ -2.06
Col6a5A6H584 AC154313.1-201ENSMUST00000217755 3841 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm24380-201ENSMUST00000122696 324 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm24288-201ENSMUST00000157630 144 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm26004-201ENSMUST00000158804 116 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm17929-201ENSMUST00000186851 627 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm44408-201ENSMUST00000200205 66 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col6a5A6H584 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm25466-201ENSMUST00000103995 132 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm23010-201ENSMUST00000104151 126 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm25025-201ENSMUST00000175018 111 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm45006-201ENSMUST00000206078 690 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Mir127-201ENSMUST00000093568 70 ntBASIC2.18□□□□□ -2.06
Col6a5A6H584 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm24177-201ENSMUST00000158927 131 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm18433-202ENSMUST00000195682 196 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms