Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PdfS4R2K0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.29□□□□□ -0.28
PdfS4R2K0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.29□□□□□ -0.28
PdfS4R2K0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.29□□□□□ -0.28
PdfS4R2K0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PdfS4R2K0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
PdfS4R2K0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.29□□□□□ -0.28
PdfS4R2K0 Dancr-204ENSMUST00000132389 2347 ntBASIC13.29□□□□□ -0.28
PdfS4R2K0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdfS4R2K0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PdfS4R2K0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.28□□□□□ -0.28
PdfS4R2K0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PdfS4R2K0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.28□□□□□ -0.28
PdfS4R2K0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.28□□□□□ -0.28
PdfS4R2K0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PdfS4R2K0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdfS4R2K0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdfS4R2K0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.27□□□□□ -0.28
PdfS4R2K0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PdfS4R2K0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.27□□□□□ -0.29
PdfS4R2K0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.27□□□□□ -0.29
PdfS4R2K0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PdfS4R2K0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PdfS4R2K0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PdfS4R2K0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdfS4R2K0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms