Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lgr5Q9Z1P4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Gm34391-201ENSMUST00000203706 907 ntBASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lgr5Q9Z1P4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgr5Q9Z1P4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Gm24589-201ENSMUST00000116692 94 ntBASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lgr5Q9Z1P4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgr5Q9Z1P4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.71■□□□□ 0.91
Lgr5Q9Z1P4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgr5Q9Z1P4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lgr5Q9Z1P4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lgr5Q9Z1P4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lgr5Q9Z1P4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lgr5Q9Z1P4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lgr5Q9Z1P4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lgr5Q9Z1P4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms