Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Gm8520-201ENSMUST00000186517 868 ntBASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ClcnkaQ9WUB7 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Gm15378-201ENSMUST00000121894 207 ntBASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ClcnkaQ9WUB7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Gm6576-201ENSMUST00000169678 883 ntBASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Gm10698-201ENSMUST00000182663 604 ntBASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ClcnkaQ9WUB7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Gm12382-201ENSMUST00000122005 922 ntBASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Gm43183-201ENSMUST00000200632 547 ntBASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ClcnkaQ9WUB7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ClcnkaQ9WUB7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms