Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cdh17Q9R100 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cdh17Q9R100 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.89■□□□□ 0.29
Cdh17Q9R100 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Cdh17Q9R100 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh17Q9R100 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.88■□□□□ 0.29
Cdh17Q9R100 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Gm10602-201ENSMUST00000098239 609 ntBASIC16.88■□□□□ 0.29
Cdh17Q9R100 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh17Q9R100 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.87■□□□□ 0.29
Cdh17Q9R100 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdh17Q9R100 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Gm13158-201ENSMUST00000122007 736 ntBASIC16.86■□□□□ 0.29
Cdh17Q9R100 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.86■□□□□ 0.29
Cdh17Q9R100 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh17Q9R100 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.85■□□□□ 0.29
Cdh17Q9R100 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdh17Q9R100 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.85■□□□□ 0.29
Cdh17Q9R100 Gm27275-201ENSMUST00000184318 272 ntBASIC16.85■□□□□ 0.29
Cdh17Q9R100 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.85■□□□□ 0.29
Cdh17Q9R100 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdh17Q9R100 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh17Q9R100 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.84■□□□□ 0.29
Cdh17Q9R100 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Gm18025-201ENSMUST00000221733 862 ntBASIC16.84■□□□□ 0.29
Cdh17Q9R100 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh17Q9R100 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms