Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Gm44450-201ENSMUST00000199528 114 ntBASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Notumos-201ENSMUST00000151998 2659 ntBASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.41■□□□□ 0.38
Col4a4Q9QZR9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a4Q9QZR9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Col4a4Q9QZR9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Col4a4Q9QZR9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Auts2-212ENSMUST00000178555 309 ntBASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a4Q9QZR9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Gm14140-201ENSMUST00000119999 995 ntBASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Gm15173-201ENSMUST00000122049 433 ntBASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a4Q9QZR9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Gm25911-201ENSMUST00000157621 56 ntBASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Gm2756-201ENSMUST00000195851 400 ntBASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a4Q9QZR9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a4Q9QZR9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms