Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1aQ9QWF0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Zfp783-201ENSMUST00000095946 670 ntBASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chaf1aQ9QWF0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1aQ9QWF0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Gm29257-201ENSMUST00000186115 639 ntBASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Gm37179-201ENSMUST00000194862 823 ntBASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Rab3c-203ENSMUST00000224180 967 ntBASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Mtag2-201ENSMUST00000058665 714 ntBASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1aQ9QWF0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1aQ9QWF0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.34■□□□□ 0.69
Chaf1aQ9QWF0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms