Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1fQ9JIS7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Birc2-201ENSMUST00000054878 378 ntBASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1fQ9JIS7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cacna1fQ9JIS7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Cacna1fQ9JIS7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1fQ9JIS7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1fQ9JIS7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms