Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup50Q9JIH2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup50Q9JIH2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nup50Q9JIH2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup50Q9JIH2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nup50Q9JIH2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.28■□□□□ 0.52
Nup50Q9JIH2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.28■□□□□ 0.52
Nup50Q9JIH2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.27■□□□□ 0.52
Nup50Q9JIH2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup50Q9JIH2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Gm12441-201ENSMUST00000121806 588 ntBASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.26■□□□□ 0.51
Nup50Q9JIH2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup50Q9JIH2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Gm4974-201ENSMUST00000209974 875 ntBASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup50Q9JIH2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Haglr-201ENSMUST00000100000 2085 ntBASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Gm13216-201ENSMUST00000117145 591 ntBASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.23■□□□□ 0.51
Nup50Q9JIH2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms