Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps35Q9EQH3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.31■□□□□ 0.36
Vps35Q9EQH3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.3■□□□□ 0.36
Vps35Q9EQH3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps35Q9EQH3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
Vps35Q9EQH3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms