Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp2aQ9DB34 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Gm12085-201ENSMUST00000119263 940 ntBASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp2aQ9DB34 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Gm4974-201ENSMUST00000209974 875 ntBASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp2aQ9DB34 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp2aQ9DB34 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp2aQ9DB34 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms