Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.97□□□□□ -0.01
Ssmem1Q9D9Y8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ssmem1Q9D9Y8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ssmem1Q9D9Y8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Mir7071-201ENSMUST00000184847 69 ntBASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Gm37025-201ENSMUST00000195159 829 ntBASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssmem1Q9D9Y8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssmem1Q9D9Y8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Gm8969-201ENSMUST00000199694 526 ntBASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms