Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps33aQ9D2N9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vps33aQ9D2N9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vps33aQ9D2N9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33aQ9D2N9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33aQ9D2N9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Vps33aQ9D2N9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33aQ9D2N9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms