Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Gm9988-201ENSMUST00000069786 435 ntBASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim42Q9D2H5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim42Q9D2H5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim42Q9D2H5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim42Q9D2H5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Gm45417-201ENSMUST00000209533 758 ntBASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim42Q9D2H5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms