Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Gm18284-201ENSMUST00000172604 624 ntBASIC16.41■□□□□ 0.22
Upk1aQ9D132 Gm7291-201ENSMUST00000199147 382 ntBASIC16.41■□□□□ 0.22
Upk1aQ9D132 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Zfp783-201ENSMUST00000095946 670 ntBASIC16.41■□□□□ 0.22
Upk1aQ9D132 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk1aQ9D132 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Upk1aQ9D132 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Upk1aQ9D132 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.39■□□□□ 0.22
Upk1aQ9D132 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk1aQ9D132 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.38■□□□□ 0.21
Upk1aQ9D132 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.38■□□□□ 0.21
Upk1aQ9D132 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.38■□□□□ 0.21
Upk1aQ9D132 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.37■□□□□ 0.21
Upk1aQ9D132 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms