Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1bQ9D0N7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Gm42778-201ENSMUST00000199644 553 ntBASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1bQ9D0N7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1bQ9D0N7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1bQ9D0N7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1bQ9D0N7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms