Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1eQ9CZQ6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1eQ9CZQ6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1eQ9CZQ6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Reep4-203ENSMUST00000226563 1444 ntBASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1eQ9CZQ6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1eQ9CZQ6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1eQ9CZQ6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1eQ9CZQ6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1eQ9CZQ6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1eQ9CZQ6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms