Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm37179-201ENSMUST00000194862 823 ntBASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm4968-201ENSMUST00000071458 858 ntBASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smc3Q9CW03 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.37■□□□□ 0.85
Smc3Q9CW03 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Gm2559-201ENSMUST00000201323 363 ntBASIC20.37■□□□□ 0.85
Smc3Q9CW03 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc3Q9CW03 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smc3Q9CW03 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc3Q9CW03 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.36■□□□□ 0.85
Smc3Q9CW03 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc3Q9CW03 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Mir6349-201ENSMUST00000184059 97 ntBASIC20.35■□□□□ 0.85
Smc3Q9CW03 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc3Q9CW03 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.35■□□□□ 0.85
Smc3Q9CW03 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc3Q9CW03 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Gm10138-203ENSMUST00000206952 366 ntBASIC20.34■□□□□ 0.85
Smc3Q9CW03 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc3Q9CW03 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc3Q9CW03 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.33■□□□□ 0.85
Smc3Q9CW03 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Gm11643-201ENSMUST00000119578 864 ntBASIC20.33■□□□□ 0.85
Smc3Q9CW03 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc3Q9CW03 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Smc3Q9CW03 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc3Q9CW03 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc3Q9CW03 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Smc3Q9CW03 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc3Q9CW03 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc3Q9CW03 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.32■□□□□ 0.84
Smc3Q9CW03 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms