Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Mir5122-201ENSMUST00000175004 89 ntBASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Gm21156-201ENSMUST00000189693 869 ntBASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retreg3Q9CQV4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Gm9987-201ENSMUST00000069768 567 ntBASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.37■□□□□ 0.37
Retreg3Q9CQV4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Gm44882-201ENSMUST00000205702 802 ntBASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg3Q9CQV4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retreg3Q9CQV4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Gm21814-202ENSMUST00000203277 873 ntBASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms