Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Q9CQC3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.95■□□□□ 0.46
Q9CQC3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.95■□□□□ 0.46
Q9CQC3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.95■□□□□ 0.46
Q9CQC3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.95■□□□□ 0.46
Q9CQC3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.95■□□□□ 0.46
Q9CQC3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Q9CQC3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Q9CQC3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CQC3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Q9CQC3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Q9CQC3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.94■□□□□ 0.46
Q9CQC3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Q9CQC3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.94■□□□□ 0.46
Q9CQC3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Gm715-201ENSMUST00000117865 831 ntBASIC17.94■□□□□ 0.46
Q9CQC3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.94■□□□□ 0.46
Q9CQC3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.94■□□□□ 0.46
Q9CQC3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.94■□□□□ 0.46
Q9CQC3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.94■□□□□ 0.46
Q9CQC3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CQC3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.93■□□□□ 0.46
Q9CQC3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q9CQC3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CQC3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.92■□□□□ 0.46
Q9CQC3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Q9CQC3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Q9CQC3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Q9CQC3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Gm10812-201ENSMUST00000099864 546 ntBASIC17.92■□□□□ 0.46
Q9CQC3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.92■□□□□ 0.46
Q9CQC3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CQC3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Q9CQC3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q9CQC3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.91■□□□□ 0.46
Q9CQC3 Timm23-208ENSMUST00000226683 750 ntBASIC17.91■□□□□ 0.46
Q9CQC3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Q9CQC3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Q9CQC3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CQC3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Q9CQC3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CQC3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.9■□□□□ 0.46
Q9CQC3 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Q9CQC3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CQC3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Q9CQC3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CQC3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Q9CQC3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CQC3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms