Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb1Q9CQ70 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb1Q9CQ70 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H2afb1Q9CQ70 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.15□□□□□ -0.15
H2afb1Q9CQ70 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Gm15039-201ENSMUST00000118914 875 ntBASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb1Q9CQ70 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms