Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Gm3375-201ENSMUST00000203929 796 ntBASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Timm23-208ENSMUST00000226683 750 ntBASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rtn4rQ99PI8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn4rQ99PI8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Gm15565-201ENSMUST00000118890 427 ntBASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Odf3b-204ENSMUST00000227834 930 ntBASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn4rQ99PI8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn4rQ99PI8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtn4rQ99PI8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms