Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Gm28033-201ENSMUST00000184224 96 ntBASIC15.16■□□□□ 0.02
Scrt1Q99M85 Gm27704-201ENSMUST00000185094 107 ntBASIC15.16■□□□□ 0.02
Scrt1Q99M85 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Gm25016-201ENSMUST00000158399 131 ntBASIC15.15■□□□□ 0.02
Scrt1Q99M85 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scrt1Q99M85 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.14■□□□□ 0.01
Scrt1Q99M85 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scrt1Q99M85 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.13■□□□□ 0.01
Scrt1Q99M85 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Mir2861-201ENSMUST00000175539 82 ntBASIC15.13■□□□□ 0.01
Scrt1Q99M85 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.13■□□□□ 0.01
Scrt1Q99M85 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scrt1Q99M85 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.13■□□□□ 0.01
Scrt1Q99M85 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
Scrt1Q99M85 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scrt1Q99M85 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms