Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1aQ921W0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1aQ921W0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp1aQ921W0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms