Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Gm37025-201ENSMUST00000195159 829 ntBASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Gm9987-201ENSMUST00000069768 567 ntBASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha11Q91Y19 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Gm7889-201ENSMUST00000185591 958 ntBASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha11Q91Y19 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Pcdha11Q91Y19 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Rarb-207ENSMUST00000225921 2756 ntBASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.2■□□□□ 0.5
Pcdha11Q91Y19 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha11Q91Y19 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Gm9731-201ENSMUST00000209480 747 ntBASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Gm7791-201ENSMUST00000219066 539 ntBASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha11Q91Y19 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms