Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Gm13401-201ENSMUST00000117074 291 ntBASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha3Q91Y16 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha3Q91Y16 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha3Q91Y16 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha3Q91Y16 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha3Q91Y16 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms