Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Gm38027-201ENSMUST00000192315 235 ntBASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Gm15565-201ENSMUST00000118890 427 ntBASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Gm24841-201ENSMUST00000158676 357 ntBASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb2Q91Y00 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb2Q91Y00 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Pcdhb2Q91Y00 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Gm27463-201ENSMUST00000183569 57 ntBASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb2Q91Y00 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb2Q91Y00 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb2Q91Y00 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms