Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb3Q91XZ7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.28■□□□□ 0.36
Pcdhb3Q91XZ7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb3Q91XZ7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb3Q91XZ7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb3Q91XZ7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb3Q91XZ7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb3Q91XZ7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb3Q91XZ7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms