Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb4Q91XZ6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Gm29791-202ENSMUST00000207888 369 ntBASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Gm4968-201ENSMUST00000071458 858 ntBASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb4Q91XZ6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Dio3-201ENSMUST00000097228 1449 ntBASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb4Q91XZ6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb4Q91XZ6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb4Q91XZ6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms