Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.85■□□□□ 0.77
Trex1Q91XB0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trex1Q91XB0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Gm11950-201ENSMUST00000121615 838 ntBASIC19.84■□□□□ 0.77
Trex1Q91XB0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.84■□□□□ 0.77
Trex1Q91XB0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.84■□□□□ 0.77
Trex1Q91XB0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trex1Q91XB0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trex1Q91XB0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trex1Q91XB0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trex1Q91XB0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trex1Q91XB0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trex1Q91XB0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trex1Q91XB0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trex1Q91XB0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Trex1Q91XB0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.82■□□□□ 0.76
Trex1Q91XB0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trex1Q91XB0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Mir770-201ENSMUST00000103252 94 ntBASIC19.81■□□□□ 0.76
Trex1Q91XB0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.81■□□□□ 0.76
Trex1Q91XB0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Gm17807-201ENSMUST00000186869 298 ntBASIC19.81■□□□□ 0.76
Trex1Q91XB0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trex1Q91XB0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.8■□□□□ 0.76
Trex1Q91XB0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.8■□□□□ 0.76
Trex1Q91XB0 Gm28033-201ENSMUST00000184224 96 ntBASIC19.8■□□□□ 0.76
Trex1Q91XB0 Gm17971-201ENSMUST00000190239 806 ntBASIC19.8■□□□□ 0.76
Trex1Q91XB0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trex1Q91XB0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.79■□□□□ 0.76
Trex1Q91XB0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms