Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.08■□□□□ 0.33
Usb1Q91W78 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.08■□□□□ 0.32
Usb1Q91W78 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 Mir8112-201ENSMUST00000184382 131 ntBASIC17.08■□□□□ 0.32
Usb1Q91W78 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.08■□□□□ 0.32
Usb1Q91W78 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.08■□□□□ 0.32
Usb1Q91W78 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usb1Q91W78 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usb1Q91W78 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Usb1Q91W78 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.07■□□□□ 0.32
Usb1Q91W78 Gm43183-201ENSMUST00000200632 547 ntBASIC17.07■□□□□ 0.32
Usb1Q91W78 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usb1Q91W78 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usb1Q91W78 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.06■□□□□ 0.32
Usb1Q91W78 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.06■□□□□ 0.32
Usb1Q91W78 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.06■□□□□ 0.32
Usb1Q91W78 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usb1Q91W78 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usb1Q91W78 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usb1Q91W78 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.05■□□□□ 0.32
Usb1Q91W78 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usb1Q91W78 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.04■□□□□ 0.32
Usb1Q91W78 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usb1Q91W78 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usb1Q91W78 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.04■□□□□ 0.32
Usb1Q91W78 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms