Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cspg4Q8VHY0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Gm15467-201ENSMUST00000120582 445 ntBASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cspg4Q8VHY0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cspg4Q8VHY0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cspg4Q8VHY0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Grk6-206ENSMUST00000224995 2971 ntBASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms