Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lmcd1Q8VEE1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lmcd1Q8VEE1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Gm27702-201ENSMUST00000184512 56 ntBASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Gm6376-201ENSMUST00000209407 580 ntBASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lmcd1Q8VEE1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.37■□□□□ 0.53
Lmcd1Q8VEE1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Mir5131-201ENSMUST00000175426 93 ntBASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lmcd1Q8VEE1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Gm5264-201ENSMUST00000190584 848 ntBASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Gm2756-201ENSMUST00000195851 400 ntBASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Gm6296-201ENSMUST00000222599 943 ntBASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lmcd1Q8VEE1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms