Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx39aQ8VDW0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx39aQ8VDW0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.23■□□□□ 0.67
Ddx39aQ8VDW0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx39aQ8VDW0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.21■□□□□ 0.67
Ddx39aQ8VDW0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Gm17661-201ENSMUST00000170317 270 ntBASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Gm7213-201ENSMUST00000215977 950 ntBASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx39aQ8VDW0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx39aQ8VDW0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms