Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upb1Q8VC97 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upb1Q8VC97 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Gm10013-201ENSMUST00000106074 672 ntBASIC18.8■□□□□ 0.6
Upb1Q8VC97 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.8■□□□□ 0.6
Upb1Q8VC97 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Gm8969-201ENSMUST00000199694 526 ntBASIC18.8■□□□□ 0.6
Upb1Q8VC97 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Upb1Q8VC97 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Gm7370-201ENSMUST00000219471 767 ntBASIC18.79■□□□□ 0.6
Upb1Q8VC97 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upb1Q8VC97 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Gm18101-201ENSMUST00000215769 548 ntBASIC18.78■□□□□ 0.6
Upb1Q8VC97 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Upb1Q8VC97 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upb1Q8VC97 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Upb1Q8VC97 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Upb1Q8VC97 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.76■□□□□ 0.59
Upb1Q8VC97 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Gm22697-201ENSMUST00000175194 63 ntBASIC18.76■□□□□ 0.59
Upb1Q8VC97 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upb1Q8VC97 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.75■□□□□ 0.59
Upb1Q8VC97 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Gm6659-201ENSMUST00000174752 547 ntBASIC18.75■□□□□ 0.59
Upb1Q8VC97 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.75■□□□□ 0.59
Upb1Q8VC97 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms