Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpap2Q8VC34 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rpap2Q8VC34 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Gm21814-202ENSMUST00000203277 873 ntBASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap2Q8VC34 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Gm17661-201ENSMUST00000170317 270 ntBASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Mir5122-201ENSMUST00000175004 89 ntBASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rpap2Q8VC34 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap2Q8VC34 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Rpap2Q8VC34 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms