Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.37■□□□□ 0.37
Vps39Q8R5L3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps39Q8R5L3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.35■□□□□ 0.37
Vps39Q8R5L3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.35■□□□□ 0.37
Vps39Q8R5L3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps39Q8R5L3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.34■□□□□ 0.37
Vps39Q8R5L3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps39Q8R5L3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps39Q8R5L3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps39Q8R5L3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms