Protein–RNA interactions for Protein: Q8R4F0

Mcoln3, Mucolipin-3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln3Q8R4F0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.82■□□□□ 0.28
Mcoln3Q8R4F0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Gm8520-201ENSMUST00000186517 868 ntBASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mcoln3Q8R4F0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Mtag2-201ENSMUST00000058665 714 ntBASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mcoln3Q8R4F0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mcoln3Q8R4F0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Gm13168-201ENSMUST00000121771 632 ntBASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.78■□□□□ 0.28
Mcoln3Q8R4F0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mcoln3Q8R4F0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mcoln3Q8R4F0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms