Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Il3ra-202ENSMUST00000223589 738 ntBASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Atp2a1Q8R429 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Gm13474-201ENSMUST00000122466 815 ntBASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Gm37025-201ENSMUST00000195159 829 ntBASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp2a1Q8R429 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm22697-201ENSMUST00000175194 63 ntBASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.35■□□□□ 0.69
Atp2a1Q8R429 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm9731-201ENSMUST00000209480 747 ntBASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Gm18101-201ENSMUST00000215769 548 ntBASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp2a1Q8R429 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 AA414768-201ENSMUST00000121924 1257 ntBASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Gm21362-201ENSMUST00000194272 928 ntBASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp2a1Q8R429 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Atp2a1Q8R429 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp2a1Q8R429 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Atp2a1Q8R429 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp2a1Q8R429 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Atp2a1Q8R429 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Gm6345-202ENSMUST00000180900 204 ntBASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Gm7370-201ENSMUST00000219471 767 ntBASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp2a1Q8R429 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms