Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Gm37292-201ENSMUST00000192062 758 ntBASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim29Q8R2Q0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim29Q8R2Q0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim29Q8R2Q0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim29Q8R2Q0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trim29Q8R2Q0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim29Q8R2Q0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Gm4974-201ENSMUST00000209974 875 ntBASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim29Q8R2Q0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim29Q8R2Q0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms