Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Gm14859-201ENSMUST00000117752 357 ntBASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Gm13186-201ENSMUST00000118031 316 ntBASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Olfr129-201ENSMUST00000122318 993 ntBASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vopp1Q8R1C3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Gm17971-201ENSMUST00000190239 806 ntBASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vopp1Q8R1C3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Gm27741-201ENSMUST00000185060 237 ntBASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Vopp1Q8R1C3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.39■□□□□ 0.54
Vopp1Q8R1C3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Vopp1Q8R1C3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.39■□□□□ 0.54
Vopp1Q8R1C3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Vopp1Q8R1C3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Gm15794-201ENSMUST00000120182 631 ntBASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Gm27742-201ENSMUST00000184667 60 ntBASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vopp1Q8R1C3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Gm27357-201ENSMUST00000183754 135 ntBASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Phf7-203ENSMUST00000226565 1971 ntBASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.38■□□□□ 0.53
Vopp1Q8R1C3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vopp1Q8R1C3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms