Protein–RNA interactions for Protein: Q8K5C8

Rdh9, Cis-retinol/androgen dehydrogenase type 3, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh9Q8K5C8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh9Q8K5C8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Gm6576-201ENSMUST00000169678 883 ntBASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh9Q8K5C8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.08■□□□□ 0.01
Rdh9Q8K5C8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Gm20760-201ENSMUST00000179197 648 ntBASIC15.08■□□□□ 0
Rdh9Q8K5C8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.08■□□□□ 0
Rdh9Q8K5C8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.08■□□□□ 0
Rdh9Q8K5C8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh9Q8K5C8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rdh9Q8K5C8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh9Q8K5C8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms