Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Gm9988-201ENSMUST00000069786 435 ntBASIC10.88□□□□□ -0.67
Cystm1Q8K353 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cystm1Q8K353 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cystm1Q8K353 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.86□□□□□ -0.67
Cystm1Q8K353 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC10.86□□□□□ -0.67
Cystm1Q8K353 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms