Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Gm43514-201ENSMUST00000198852 424 ntBASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Birc2-201ENSMUST00000054878 378 ntBASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shtn1Q8K2Q9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.37■□□□□ 0.85
Shtn1Q8K2Q9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shtn1Q8K2Q9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Gm6443-201ENSMUST00000203599 874 ntBASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shtn1Q8K2Q9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Gm15794-201ENSMUST00000120182 631 ntBASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shtn1Q8K2Q9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms